Insertion junction: CLIP2.044869_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.044869
Chromosome:chromosome 5
Location:1286941
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00245618

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACCGCTGCACACCCTGCACTGTCGAGGGCCCTTGTCGGCCCATTTTCC
Internal bar code:GGTCACTGAACCGATAATCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2214
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTCCTCAGGAAAAGGGCT
Suggested primer 2:AGCATCCTCCTCCCACATCT