Insertion junction: CLIP2.044880_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.044880
Chromosome:chromosome 3
Location:2859180
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g162333 (1 of 3) IPR000104//IPR003439//IPR003593//IPR013525//IPR027417 - Antifreeze protein, type I // ABC transporter-like // AAA+ ATPase domain // ABC-2 type transporter // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATGTAATCCCCCTACCACCCACCCACCCACACACACACACACACACAC
Internal bar code:TTTGTTACGGGGTCGTTATTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:180
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGTGTGGATGGGATGGGG
Suggested primer 2:ACCTATCCCCTCCAACCCTC