Insertion junction: CLIP2.044883_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.044883
Chromosome:chromosome 10
Location:3405229
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g443950 (1 of 2) PF04564//PF05049 - U-box domain (U-box) // Interferon-inducible GTPase (IIGP) (IIGP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCGGCACGACCGAGTGCCCCGCCGCGCAGTACTTCCGCGACATGTGC
Internal bar code:TCCTGGCCTATCCTTCGTTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5180
LEAP-Seq percent confirming:92.5
LEAP-Seq n confirming:111
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:120

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGGAGCCTTTAGGTGGTG
Suggested primer 2:AACTGCTCTCATGCGAACCA