Insertion junction: CLIP2.044884_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.044884
Chromosome:chromosome 4
Location:1824480
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217850 (1 of 3) IPR000104//IPR003439//IPR003593//IPR013525//IPR027417 - Antifreeze protein, type I // ABC transporter-like // AAA+ ATPase domain // ABC-2 type transporter // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATTGTTATTCATGTCTTGTTATTCAAGTCTATTTGGTCCCACTCACTT
Internal bar code:TGAGGTCGTATCAAGGTAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:550
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGAGACCATACTTACCCG
Suggested primer 2:CATCAGCAGTTTCGGCAGTG