Insertion junction: CLIP2.044927_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.044927
Chromosome:chromosome 7
Location:477821
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g315550 (1 of 2) IPR005654//IPR027417 - ATPase, AFG1-like // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCATCCTGCCTGCCCACACGCTGGCGGCCTGCCTGCCGCCCTTTCCC
Internal bar code:AGGGGGTCCTGATATCGCATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:225
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGATGCGCCTCACTCTAG
Suggested primer 2:AGCCATAATGCGTCTACCCG