Insertion junction: CLIP2.044954_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.044954
Chromosome:chromosome 6
Location:7922018
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g304050 PKC1 Protein Kinase C; (1 of 3) K15710 - E3 ubiquitin-protein ligase SHPRH [EC:3.6.4.- 6.3.2.19] (SHPRH) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGAACGGTTTGGCGCGTGGGTGTGATGGACCAGGCGAATGGACCAGG
Internal bar code:TCCCGGAAATCTCTAACACGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:875
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTCTTTTGAAGCTGGCGC
Suggested primer 2:ATGAACTGTTGTACGGCCGT