Insertion junction: CLIP2.044954_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.044954
Chromosome:chromosome 6
Location:7922021
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g304050 PKC1 Protein Kinase C; (1 of 3) K15710 - E3 ubiquitin-protein ligase SHPRH [EC:3.6.4.- 6.3.2.19] (SHPRH) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCATGCGCCGCCTGGCTGCTGCAGCCCCGGGTGCTCCAGCACCTCCTGC
Internal bar code:TCCCGGAAATCTCTAACACGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3283
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAACTGTTGTACGGCCGT
Suggested primer 2:TTGTCTTTTGAAGCTGGCGC