Insertion junction: CLIP2.044968_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.044968
Chromosome:chromosome 11
Location:1167364
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467680 (1 of 13) 3.1.13.4 - Poly(A)-specific ribonuclease outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGAGGGGTGTGGCACAGAATGGCTGCAGTCGCAGAAATAAAAGGGCAC
Internal bar code:AGGGATGCACTGTGGTGGATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1395
LEAP-Seq percent confirming:55.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTGACACTCTGCTGCAGA
Suggested primer 2:TTCACCTCCATCCACAACGG