Insertion junction: CLIP2.044980_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.044980
Chromosome:chromosome 8
Location:3391705
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g377900 (1 of 7) PF05869 - DNA N-6-adenine-methyltransferase (Dam) (Dam) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTCGAGGCATGCCGAGTCAACAGGGTGCATGCATGTGTAGAGGATGGG
Internal bar code:TAGGGTGAAACTAGGATATACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1380
LEAP-Seq percent confirming:47.1264
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:46
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTTCTCCTGCTCCTCCT
Suggested primer 2:ACGTACACAACCACCATCCC