Insertion junction: CLIP2.044986_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.044986
Chromosome:chromosome 9
Location:1824032
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397900 (1 of 1) PTHR21347:SF0 - CLEFT LIP AND PALATE TRANSMEMBRANE PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGAAGTGTCGTTGTCAAACAGGTACAGCAGGATCACCACCTGCGCAAG
Internal bar code:TGGATCAAGTACTTTGTGTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2728
LEAP-Seq percent confirming:82.9268
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTACAGGGCCTGACGTTC
Suggested primer 2:CTACGTCGCATAGGGGTGAC