Insertion junction: CLIP2.044986_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.044986
Chromosome:chromosome 9
Location:1824033
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397900 (1 of 1) PTHR21347:SF0 - CLEFT LIP AND PALATE TRANSMEMBRANE PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGTGCTGCTCAGCAGCGTGCTGGGCACCGGTATCGAGCTGTGGAAGGT
Internal bar code:ACTCTCTAGAAGTGCTCTCCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3861
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CTACGTCGCATAGGGGTGAC
Suggested primer 2:TGTTACAGGGCCTGACGTTC