Insertion junction: CLIP2.044990_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.044990
Chromosome:chromosome 17
Location:5734741
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g740800 (1 of 5) PF06742//PF06863 - Protein of unknown function (DUF1214) (DUF1214) // Protein of unknown function (DUF1254) (DUF1254) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGACGGCATTCGGTGAGCGACAGCAGCTTTTCTAGCATCATTCCCTTCG
Internal bar code:CATAGCCACACCAATCTGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:995
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TCGGAGGGCCAGAAGTAGAA
Suggested primer 2:AAGCTAGCACAATGAGCGGT