Insertion junction: CLIP2.044993_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.044993
Chromosome:chromosome 6
Location:5118403
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g282900 (1 of 1) K09288 - coiled-coil domain-containing protein 6 (CCDC6, PTC) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAAAGCAGACCATCCGGACGATGCAGTGCGGCTTCCTACAAGCGTGGA
Internal bar code:CTCACTTTGATATGTTGGGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1841
LEAP-Seq percent confirming:86.9565
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TGGACCAACTCAAACGGGAG
Suggested primer 2:TTCTGCAGCCGGTTCAGAAT