Insertion junction: CLIP2.044999_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.044999
Chromosome:chromosome 5
Location:2311938
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238260 (1 of 1) PF13371//PF13414//PF13432 - Tetratricopeptide repeat (TPR_9) // TPR repeat (TPR_11) // Tetratricopeptide repeat (TPR_16) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAAACATTGGGAACAGGATACAAGCAGGGGAGAGCAAGTAAGAACAGCA
Internal bar code:GGGGGGTAAGCGATAATGTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:125
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCGTACGTTCATGATTGC
Suggested primer 2:GACCAGACAGGGGGAAGTTG