Insertion junction: CLIP2.045003_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.045003
Chromosome:chromosome 8
Location:4412896
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g385250 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTGCTTGTTGCTTTGCATGTGTTAGGTAAGCACAAGGGGCGTGTGTT
Internal bar code:ATGTTTTCGCAGCACGTATAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1256
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTTGTGTCTCATGTCCCA
Suggested primer 2:GCAACAACAGCAGCAGTACC