Insertion junction: CLIP2.045006_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045006
Chromosome:chromosome 3
Location:5879394
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g188450 PTX2 Phototaxis regulator intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTGCGAGGCCTGGGTGGCGCTGCGGCGAAGTCGCTGTCAGGACAGGCG
Internal bar code:GATAGGTGTACACATCTGCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:929
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TTAGGAGACCGTTGTGGCAC
Suggested primer 2:GGCCAAAACACACGACTGAC