Insertion junction: CLIP2.045008_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045008
Chromosome:chromosome 12
Location:4664493
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g522350 TSW1 (1 of 2) 6.1.1.2 - Tryptophan--tRNA ligase / Tryptophanyl-tRNA synthetase; Trryptophanyl-tRNA synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTTATACCGGACATACCGGGTATGCGTCATACGAGCCGTCATGCAATC
Internal bar code:ATACTTAGCTTCAGTAGTGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4123
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTACCTCAATCCCTACGC
Suggested primer 2:GACAACATCGGCAAGATCGC