Insertion junction: CLIP2.045010_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045010
Chromosome:chromosome 12
Location:2643615
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g505750 RPB9 DNA-directed RNA polymerase II, 14.5 kDa polypeptide; (1 of 1) K03017 - DNA-directed RNA polymerase II subunit RPB9 (RPB9, POLR2I) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCTCGTTGTGGTTGCACTTTGGGCAGCGCACATCGCGCGTGCGCGGC
Internal bar code:TTCGATGTAGATCGCCAAGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:4696
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAAATTCCGCGCGGTTAC
Suggested primer 2:GCATGGCGTAACCCGAAATC