Insertion junction: CLIP2.045011_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.045011
Chromosome:chromosome 16
Location:5266358
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684100 (1 of 239) IPR016024 - Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCGCCGTGGAAGCGGTGCCGCATTCCAAGTGCTGAAAGTGCCGCCCTT
Internal bar code:GGGGTTCAGTACCCCGCATCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1399
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCTCTGCTCTTAGGCTGC
Suggested primer 2:GTTCAGTCCCGGCTAGCTAC