Insertion junction: CLIP2.045015_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045015
Chromosome:chromosome 9
Location:5586316
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGTGGGTAGTCAAGCGTTGGCTTAATGGGCTGGTTGCCTTCGAGGTGC
Internal bar code:CTTGTTTGGGCGGGAATTACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1674
LEAP-Seq percent confirming:72.6316
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:95

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCCGAGAGAGGAAAGGAT
Suggested primer 2:ATGGTGTGTGTTGGGTGTGT