Insertion junction: CLIP2.045019_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.045019
Chromosome:chromosome 12
Location:7751017
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g554400 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGATGAAACGGTCTATGAGCCTATAGCAGATTGGAGCGGCTATGTATG
Internal bar code:TGTTGTTTCACGTGGTACTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1762
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GACTGGCAGGATGATGCTGT
Suggested primer 2:GCGATACTCACTCGACCCAG