Insertion junction: CLIP2.045019_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045019
Chromosome:chromosome 13
Location:136921
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g562800 FAP337 (1 of 1) PTHR22844//PTHR22844:SF191 - F-BOX AND WD40 DOMAIN PROTEIN // SUBFAMILY NOT NAMED; WD40-repeat Flagellar Associated Protein 337 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCCGACGCCGTGTATGCGGCGGGGTGGAACTGCAAGGTGTTCGTGTGG
Internal bar code:AATCCTTGGGCCTTGCATCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:340
LEAP-Seq percent confirming:19.0476
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCCACTCCACCTCCATA
Suggested primer 2:GCCACTTCTTTCTCGCTCCT