Insertion junction: CLIP2.045020_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.045020
Chromosome:chromosome 9
Location:64464
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386161 (1 of 13) PF05050 - Methyltransferase FkbM domain (Methyltransf_21) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTAACTGGCTGACGACAGGAAAGGTGGCTCTCCCTCTCAAGAGAAACG
Internal bar code:ACTTGTAATAATAATATGGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1381
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGATAAAGCCACGGTGGG
Suggested primer 2:GTGAGAGACGGACGGCATAG