Insertion junction: CLIP2.045021_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045021
Chromosome:chromosome 6
Location:1209448
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g258400 (1 of 1) PF08737 - Rgp1 (Rgp1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAAGCATGCCGCGGCGAGCGGTCGGCGCAGTCAGAGCAGTTCCGCGCTC
Internal bar code:ATTTACCTAGGCTTTATTACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:462
LEAP-Seq percent confirming:18.1818
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GATGAGGGGCAGCTGCTAAA
Suggested primer 2:GTAGTCGATCATGCCCACGT