Insertion junction: CLIP2.045032_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.045032
Chromosome:chromosome 1
Location:3844427
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g025200 MMP4 Metalloproteinase of VMP family; (1 of 40) 3.4.24.38 - Gametolysin / Lysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGACATTCCCGTGCGCCCTTCTTGCTATCACTGCGCCCCGCAGTCGC
Internal bar code:GGTTCCTCGGAAATGGGCTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3056
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:105
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:108

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCACTCCTCCTAGGCTGA
Suggested primer 2:GTCCGCATAACTTTCGTCGC