Insertion junction: CLIP2.045033_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045033
Chromosome:chromosome 12
Location:688550
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g493000 (1 of 1) IPR006153//IPR020846 - Cation/H+ exchanger // Major facilitator superfamily domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAAATACGTGCAGGATTGAAGCGGGAAGCTGTGTGGGCCAAAGCACGC
Internal bar code:GTAGGGGCTAGACGGTGCGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:233
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCATCCTGTACCGCTTTT
Suggested primer 2:GCCCAAAGCAAACCAAACCA