Insertion junction: CLIP2.045035_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.045035
Chromosome:chromosome 1
Location:2900680
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g018050 NEF1 (1 of 1) PTHR35313//PTHR35313:SF1 - FAMILY NOT NAMED // NO EXINE FORMATION 1; NEF1-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCACAGGATACCCAGAGCCGGCAGCGCCACCGGCCCGCCGGCCTTGGG
Internal bar code:CACGTTCGGACTGTGTTGGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:719
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAGACGTGGAGATCTGGG
Suggested primer 2:ATGGCAGCGAGTTGGATTGA