Insertion junction: CLIP2.045035_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045035
Chromosome:chromosome 1
Location:2900685
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g018050 NEF1 (1 of 1) PTHR35313//PTHR35313:SF1 - FAMILY NOT NAMED // NO EXINE FORMATION 1; NEF1-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGCGGCCTGGCGCTGCTGTTGCACGCCGAGCTGCCGGTGTCGGCGGAC
Internal bar code:CATGGAGTAAGTGTGACCGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3948
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGCAGCGAGTTGGATTGA
Suggested primer 2:CGAAGACGTGGAGATCTGGG