Insertion junction: CLIP2.045036_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.045036
Chromosome:chromosome 2
Location:5615906
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g115500 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTATGTATGCTTGAAACGGTACCGGACATATCATCCATGCGCCATCAAC
Internal bar code:GATAATGTATTCCTTGGTTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1643
LEAP-Seq percent confirming:93.5484
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCACTGCACAGTAATAGC
Suggested primer 2:TGAGTTTGTTTCTTGCGCCG