Insertion junction: CLIP2.045042_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.045042
Chromosome:chromosome 1
Location:1727521
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCTCACAAAGTGCAAGGTGAAGACCGACCACACAACCGAGGCCATGGT
Internal bar code:AGGTGTTTGATTAGTTTTGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1380
LEAP-Seq percent confirming:86.9565
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CATACTATGCGCCTCAGCCA
Suggested primer 2:TAGCAGCCGTTGGATCGATC