Insertion junction: CLIP2.045042_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045042
Chromosome:chromosome 9
Location:1568756
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399073 (1 of 2) PTHR14209:SF9 - ISOAMYL ACETATE-HYDROLYZING ESTERASE 1 HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGGCCGCAGGCACAGCGCGCGGCAGCACGTGCCGGTGGACGAGTACG
Internal bar code:GGAATCCAGGGCTTGTACAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:459
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAACACCACAAGCAGCAG
Suggested primer 2:TAGCTGTCAGTCTGCAGTGC