Insertion junction: CLIP2.045045_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.045045
Chromosome:chromosome 12
Location:1627761
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g486851 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGACTACCCCACCCTGTGCATCCCCCCCCTCGCAGCCAGCAGCTGCAG
Internal bar code:GCTTCCTCTTGTAGGATTATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:939
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTCTGACGGGCCAGTGAG
Suggested primer 2:GAATCGCGCCTGGGGTTATA