Insertion junction: CLIP2.045052_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045052
Chromosome:chromosome 12
Location:2708207
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g505050 (1 of 13) PF00646 - F-box domain (F-box) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGAGCAGGGGCTGCGGAGGGCAGCGGGGGCGTGTGGGGATAGGGCCAG
Internal bar code:GAAAAAGGCTTTTAGTTTACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2361
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCTCGACTCTTCACACAA
Suggested primer 2:CATACCCACTCACCCAGCTG