Insertion junction: CLIP2.045056_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.045056
Chromosome:chromosome 11
Location:641885
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467613 (1 of 1) IPR000742//IPR001881 - EGF-like domain // EGF-like calcium-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCTACCCATGCACAAGAGGGCGAGAGAGGGATTGCGTTGAGGCACATC
Internal bar code:GGGGTAATGGTACTCTTATACA

Confirmation - LEAP-Seq

LEAP-Seq distance:979
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TCGGGTAGAGGTGGCACATA
Suggested primer 2:ATAGCGGGCTTCAGGGTTTC