Insertion junction: CLIP2.045073_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.045073
Chromosome:chromosome 16
Location:2613024
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661200 THB8 (1 of 6) PTHR10681//PTHR10681:SF118 - THIOREDOXIN PEROXIDASE // SUBFAMILY NOT NAMED; Truncated hemoglobin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGACAGGGAATGGAATGAGGCCTTCGCAACATTGAATTGCAACTTTAC
Internal bar code:TAGTGATTCGAGGTGACTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2525
LEAP-Seq percent confirming:58.8235
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCGAAAGACTTCACCCT
Suggested primer 2:GTCAATGGGGTGACATGGGT