Insertion junction: CLIP2.045074_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.045074
Chromosome:chromosome 16
Location:2212564
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g658200 (1 of 2) IPR003594//IPR024975 - Histidine kinase-like ATPase, C-terminal domain // Domain of unknown function DUF3883 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTCCGCGTGCAGCGGCGGAGGCGCTGCCGAACAACCTGAGGGGGTAA
Internal bar code:ATGGGTGAATGGATGAATGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:544
LEAP-Seq percent confirming:62.069
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTGCTCCTTACTCCTCCT
Suggested primer 2:CAAAAGGAAGTCCGCGTGTG