Insertion junction: CLIP2.045082_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045082
Chromosome:chromosome 1
Location:4170689
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g027900 (1 of 1) K17338 - receptor expression-enhancing protein 1/2/3/4 (REEP1_2_3_4); similar to HAV22 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGAGGTGTATGTGACGGGACAACTGGCGGTGAGGGCGGGAGACGGGCAC
Internal bar code:TATTGCGCTCGAGGATTGGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:3433
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:120

Suggested primers for confirmation by PCR

Suggested primer 1:CACCACGAACAACAGCTTGG
Suggested primer 2:GTTCCCAGCCTACATGACCC