Insertion junction: CLIP2.045085_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045085
Chromosome:chromosome 2
Location:5178206
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g112000 AOT7 Amino acid transporter; (1 of 1) K14997 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 11 (SLC38A11) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCTGCGGGACCCGCTGCTTGCGCCGGCGGCGGCGCGGCCGCATGAGAG
Internal bar code:GACCAAGTGTTACAGCGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:942
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CACCACCCGACAAAGCTTTG
Suggested primer 2:GGCATGGTCACCACACACTA