Insertion junction: CLIP2.045090_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045090
Chromosome:chromosome 16
Location:5844593
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g679800 (1 of 2) PTHR17630//PTHR17630:SF43 - DIENELACTONE HYDROLASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCCCTCTCCAACCCAATGACATCTTTGACTCGTATAGTCATATGGCG
Internal bar code:ATAATTATCTACGAATTAAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1273
LEAP-Seq percent confirming:69.3878
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGAGGGGTCCATGCTTG
Suggested primer 2:CATCAATCTGCGGCTTGAGC