Insertion junction: CLIP2.045105_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.045105
Chromosome:chromosome 11
Location:849258
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467645 (1 of 2) PTHR10540:SF8 - COP9 SIGNALOSOME COMPLEX SUBUNIT 6 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCTGTCTCGCGTACGACAAGGCGGGCCGCGGCCGGCTGGGGATGGGCG
Internal bar code:AGTTTTTATGCATAGTGTGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2879
LEAP-Seq percent confirming:96.4912
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTCCTTTGGGAGGCGATG
Suggested primer 2:TGCACACACATTCACGCTTG