Insertion junction: CLIP2.045110_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.045110
Chromosome:chromosome 17
Location:3503436
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g724200 LAL1 (1 of 1) K11090 - lupus La protein (LA, SSB); La protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTCCATGGCATCGCCGACTGCACCCGCAAGCCGACTGCACCCGTGAGC
Internal bar code:TCGCGGTAACACTAGTCCTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:265
LEAP-Seq percent confirming:4.16667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAGATCTTACCCGACCTC
Suggested primer 2:GTGGCTGTAGTCCAACTCCC