Insertion junction: CLIP2.045110_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045110
Chromosome:chromosome 17
Location:3503442
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g724200 LAL1 (1 of 1) K11090 - lupus La protein (LA, SSB); La protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGCTTGGCGTCCTCTCCGGTCGTCGTCCCTGAGCCAGTCAGCCAAAG
Internal bar code:GCGGGATGTCCCGGTTTAGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2182
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGCTGTAGTCCAACTCCC
Suggested primer 2:CGCAGATCTTACCCGACCTC