Insertion junction: CLIP2.045126_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.045126
Chromosome:chromosome 16
Location:3974096
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g689700 HPR5 (1 of 1) 1.1.1.272 - D-2-hydroxyacid dehydrogenase (NADP(+)); Hydroxypyruvate reductase 5 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCATGAAACATGGAATGTACAGCGGGCGCTTGGTTCCCGGCTTTTCGC
Internal bar code:TGGAGGTGCCGCTGCCTGACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:271
LEAP-Seq percent confirming:62.963
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCTGCTTTATGGGACCTT
Suggested primer 2:GCGAGTACATCCTCTCCTGC