Insertion junction: CLIP2.045132_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.045132
Chromosome:chromosome 2
Location:1999293
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g088300 CPK6 (1 of 1) PTHR10584:SF179 - PROTEIN MAK32; putative carbohydrate kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCCCAATGGAGAGACGGTGATGGAGGTGCTGGGCGGGGGCGGGCCCC
Internal bar code:GAATGGGGGTAGCGTTGTGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1030
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAACCCATGCATGTGTGT
Suggested primer 2:GTCGACATAGCGGTGTAGGG