Insertion junction: CLIP2.045135_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045135
Chromosome:chromosome 12
Location:687332
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g493000 (1 of 1) IPR006153//IPR020846 - Cation/H+ exchanger // Major facilitator superfamily domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGCCGGCCATGGGCGCCATGGAGCCCATGGAGCCGCCCATACTGCTGG
Internal bar code:TACGGGAAAGTCTAAACACAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1108
LEAP-Seq percent confirming:93.5484
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTTTGGTTTGCTTTGGGC
Suggested primer 2:AGTCCAATGCTGGCCATGAA