Insertion junction: CLIP2.045149_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.045149
Chromosome:chromosome 1
Location:3721358
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800070 (1 of 1) PF08482 - ATP-dependent helicase C-terminal (HrpB_C) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTGCGCCAAAAGGAGGCGAGGTCCGAGGTCACCTGCGTCGTGGTGTCA
Internal bar code:ACGTAAGATTGTTGCGGGATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1101
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCACAGACTTCAGGAGG
Suggested primer 2:TGGGCATCTTGTCTGTGGAC