Insertion junction: CLIP2.045152_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045152
Chromosome:chromosome 6
Location:4865208
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280420 PAP6 (1 of 2) PTHR12271:SF40 - POLY(A) RNA POLYMERASE GLD2; Class-II RNA nucleotidyl transferase 6 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGATGCGGTTCCGCTTCTTGAAATCGGCGAATGTGTCGAAGTCCCTGCA
Internal bar code:CGAATCCGTCATCGAAGTGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2258
LEAP-Seq percent confirming:58.3333
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:50
LEAP-Seq n unique pos:120

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGTGAGTATGCGCATGC
Suggested primer 2:ATCAGGGTCGTCATCTCGGA