Insertion junction: CLIP2.045152_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.045152
Chromosome:chromosome 6
Location:4865214
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280420 PAP6 (1 of 2) PTHR12271:SF40 - POLY(A) RNA POLYMERASE GLD2; Class-II RNA nucleotidyl transferase 6 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCAAGGTCATCAACGACGACAAGTACATGACGGAGGAGGTGAAAGCGA
Internal bar code:CGAATCCGTCATCGAAGTGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1943
LEAP-Seq percent confirming:98.0392
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:ATCAGGGTCGTCATCTCGGA
Suggested primer 2:CTGTGTGAGTATGCGCATGC