Insertion junction: CLIP2.045161_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045161
Chromosome:chromosome 1
Location:5471211
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g038700 CLV5 Voltage-gated chloride channel; (1 of 2) K05016 - chloride channel 7 (CLCN7) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGCTCGGGTACGTGGCGTGCGTGTCTCATACACACATGCATGTGCAT
Internal bar code:TATGTACCAATCACCGGTTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:499
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGCGGCTAGGAAGTAGAA
Suggested primer 2:CATGTCACCCATTCCTGCCT