Insertion junction: CLIP2.045167_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.045167
Chromosome:chromosome 10
Location:2838050
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g439100 CCT1 T-complex protein 1, alpha subunit; (1 of 1) K09493 - T-complex protein 1 subunit alpha (CCT1, TCP1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAAAGCTCAAACTTACACGTGTCCTGAAGCGGCGTGCCTGCGGTGTGC
Internal bar code:GGTCCGAGGTACCCTGGAAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2271
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGATGAGGCAGGCTCGTG
Suggested primer 2:CTGGTGGACGACATTGGTGA